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eco ri sites  (TaKaRa)


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    Structured Review

    TaKaRa eco ri sites
    Eco Ri Sites, supplied by TaKaRa, used in various techniques. Bioz Stars score: 99/100, based on 16033 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/eco+ri+sites/EcoR+I/pmc13185574-204-41-46
    Average 99 stars, based on 16033 article reviews
    eco ri sites - by Bioz Stars, 2026-10
    99/100 stars

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    Produced:

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation.
    Article Snippet: .. GFPFis1 was produced by PCR- based cloning of rat Fis1 [amplified from p3xFLAG- CMV- 10- Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP- C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation
    Article Snippet: .. GFP-Fis1 was produced by PCR-based cloning of rat Fis1 [amplified from p3xFLAG-CMV-10-Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP-C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Polymerase Chain Reaction:

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation.
    Article Snippet: .. GFPFis1 was produced by PCR- based cloning of rat Fis1 [amplified from p3xFLAG- CMV- 10- Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP- C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: Engineering back-splicing-like sites for enhanced linear RNA expression
    Article Snippet: .. The recovered PCR products were connected with the linear transfer vector pFastBacdual at the Xba I and Eco RI sites via T4 DNA ligase (TaKaRa, Beijing, China). ..

    Article Title: Engineering back-splicing-like sites for enhanced linear RNA expression
    Article Snippet: .. The recovered PCR products were connected with the linear pIZT-V5/His vector at the Xba I and Eco RI sites via T4 DNA ligase (TaKaRa, Beijing, China). ..

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation
    Article Snippet: .. GFP-Fis1 was produced by PCR-based cloning of rat Fis1 [amplified from p3xFLAG-CMV-10-Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP-C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: Evolution-guided prioritization identifies a tissue-specific phosphorylation switch on herpes simplex virus 1 UL7 regulating viral replication and pathogenicity
    Article Snippet: .. pRetroX-TRE3G-UL6o, used to generate stable Vero cells with tetracycline-inducible UL6 expression, was constructed by cloning the entire coding sequences of codon-optimized UL6o amplified via PCR from pUC57-UL6o, which were synthesized (GenScript) using the primers 5′-gcggatccgcaaccatgacagc-3′ and 5′-gcgaattcgcaagagcgacagcgagcg-3′, into Bam HI and Eco RI sites of pRetroX-TRE3G (TaKaRa). .. The synthesized DNA sequences are shown in . pMAL-UL6-P1, used to generate a fusion protein of maltose-binding protein (MBP) and a domain of UL6, was constructed by cloning the domains of UL6 (encoded by UL6 codons 307-515) amplified by PCR from pYEbac102Cre ( , ) using the primers 5′-gcgaattccgcaagagcgacagcgagcg-3′ and 5′-gcaagctttcagtgctgaaaactgttggcga-3′ into pMAL-c (New England Biolabs) in-frame with MBP.

    Article Title: SUMO1 modification of 0N4R-tau is regulated by PIASx, SENP1, SENP2, and TRIM11
    Article Snippet: pRK5-EGFP-Tau (0N4R) was a gift from Karen Ashe (Addgene plasmid # 46904) [ ]. .. To construct pcDNA-FLAG-tau, tau cDNA was amplified by PCR with primers (5′-ACGATGACAAGCTTGGCATGGACGAGCTGTACAAG-3′ and 5′- GATATCTGCAGAATTCTCGACTCACAAACCCTGCTT-3′) and inserted between the Kpn I and Eco RI sites of pcDNA3.1(+) with FLAG sequence (ACCATGGATTACAAGGACGACGATGAC between Nhe I and Hin dIII sites) by In-Fusion Cloning (Takara Bio, Shiga, Japan). ..

    Cloning:

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation.
    Article Snippet: .. GFPFis1 was produced by PCR- based cloning of rat Fis1 [amplified from p3xFLAG- CMV- 10- Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP- C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation
    Article Snippet: .. GFP-Fis1 was produced by PCR-based cloning of rat Fis1 [amplified from p3xFLAG-CMV-10-Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP-C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: Evolution-guided prioritization identifies a tissue-specific phosphorylation switch on herpes simplex virus 1 UL7 regulating viral replication and pathogenicity
    Article Snippet: .. pRetroX-TRE3G-UL6o, used to generate stable Vero cells with tetracycline-inducible UL6 expression, was constructed by cloning the entire coding sequences of codon-optimized UL6o amplified via PCR from pUC57-UL6o, which were synthesized (GenScript) using the primers 5′-gcggatccgcaaccatgacagc-3′ and 5′-gcgaattcgcaagagcgacagcgagcg-3′, into Bam HI and Eco RI sites of pRetroX-TRE3G (TaKaRa). .. The synthesized DNA sequences are shown in . pMAL-UL6-P1, used to generate a fusion protein of maltose-binding protein (MBP) and a domain of UL6, was constructed by cloning the domains of UL6 (encoded by UL6 codons 307-515) amplified by PCR from pYEbac102Cre ( , ) using the primers 5′-gcgaattccgcaagagcgacagcgagcg-3′ and 5′-gcaagctttcagtgctgaaaactgttggcga-3′ into pMAL-c (New England Biolabs) in-frame with MBP.

    Article Title: SUMO1 modification of 0N4R-tau is regulated by PIASx, SENP1, SENP2, and TRIM11
    Article Snippet: pRK5-EGFP-Tau (0N4R) was a gift from Karen Ashe (Addgene plasmid # 46904) [ ]. .. To construct pcDNA-FLAG-tau, tau cDNA was amplified by PCR with primers (5′-ACGATGACAAGCTTGGCATGGACGAGCTGTACAAG-3′ and 5′- GATATCTGCAGAATTCTCGACTCACAAACCCTGCTT-3′) and inserted between the Kpn I and Eco RI sites of pcDNA3.1(+) with FLAG sequence (ACCATGGATTACAAGGACGACGATGAC between Nhe I and Hin dIII sites) by In-Fusion Cloning (Takara Bio, Shiga, Japan). ..

    Article Title: Phosphorylation of Arabidopsis UVR8 photoreceptor modulates protein interactions and responses to UV-B radiation
    Article Snippet: .. The coding sequences of Arabidopsis UVR8 wild-type and mutants N-terminally fused with GFP, and RUP1, RUP2 or COP1 N-terminally fused with HA were cloned into the pcDNA3.1 mammalian expression plasmid (ThermoFisher) between the Hin dIII and Eco RI sites using an In-Fusion HD Cloning kit (Takara Bio, USA). ..

    Amplification:

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation.
    Article Snippet: .. GFPFis1 was produced by PCR- based cloning of rat Fis1 [amplified from p3xFLAG- CMV- 10- Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP- C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: SUMOylation of MFF coordinates fission complexes to promote stress-induced mitochondrial fragmentation
    Article Snippet: .. GFP-Fis1 was produced by PCR-based cloning of rat Fis1 [amplified from p3xFLAG-CMV-10-Fis1, a gift from M. Schrader (University of Exeter, UK)] into the Hind III and Eco RI sites of pEGFP-C3 (Clontech), using the primers rFis1 Hind III F (CTCAAGCTTATGGAAGCCGTGCTGAACGAG) and rFis1 EcoR1 R (GTGGAATTCCCTTCAGGATTTGGACTTGGACAC). ..

    Article Title: Evolution-guided prioritization identifies a tissue-specific phosphorylation switch on herpes simplex virus 1 UL7 regulating viral replication and pathogenicity
    Article Snippet: .. pRetroX-TRE3G-UL6o, used to generate stable Vero cells with tetracycline-inducible UL6 expression, was constructed by cloning the entire coding sequences of codon-optimized UL6o amplified via PCR from pUC57-UL6o, which were synthesized (GenScript) using the primers 5′-gcggatccgcaaccatgacagc-3′ and 5′-gcgaattcgcaagagcgacagcgagcg-3′, into Bam HI and Eco RI sites of pRetroX-TRE3G (TaKaRa). .. The synthesized DNA sequences are shown in . pMAL-UL6-P1, used to generate a fusion protein of maltose-binding protein (MBP) and a domain of UL6, was constructed by cloning the domains of UL6 (encoded by UL6 codons 307-515) amplified by PCR from pYEbac102Cre ( , ) using the primers 5′-gcgaattccgcaagagcgacagcgagcg-3′ and 5′-gcaagctttcagtgctgaaaactgttggcga-3′ into pMAL-c (New England Biolabs) in-frame with MBP.

    Article Title: SUMO1 modification of 0N4R-tau is regulated by PIASx, SENP1, SENP2, and TRIM11
    Article Snippet: pRK5-EGFP-Tau (0N4R) was a gift from Karen Ashe (Addgene plasmid # 46904) [ ]. .. To construct pcDNA-FLAG-tau, tau cDNA was amplified by PCR with primers (5′-ACGATGACAAGCTTGGCATGGACGAGCTGTACAAG-3′ and 5′- GATATCTGCAGAATTCTCGACTCACAAACCCTGCTT-3′) and inserted between the Kpn I and Eco RI sites of pcDNA3.1(+) with FLAG sequence (ACCATGGATTACAAGGACGACGATGAC between Nhe I and Hin dIII sites) by In-Fusion Cloning (Takara Bio, Shiga, Japan). ..

    Expressing:

    Article Title: Evolution-guided prioritization identifies a tissue-specific phosphorylation switch on herpes simplex virus 1 UL7 regulating viral replication and pathogenicity
    Article Snippet: .. pRetroX-TRE3G-UL6o, used to generate stable Vero cells with tetracycline-inducible UL6 expression, was constructed by cloning the entire coding sequences of codon-optimized UL6o amplified via PCR from pUC57-UL6o, which were synthesized (GenScript) using the primers 5′-gcggatccgcaaccatgacagc-3′ and 5′-gcgaattcgcaagagcgacagcgagcg-3′, into Bam HI and Eco RI sites of pRetroX-TRE3G (TaKaRa). .. The synthesized DNA sequences are shown in . pMAL-UL6-P1, used to generate a fusion protein of maltose-binding protein (MBP) and a domain of UL6, was constructed by cloning the domains of UL6 (encoded by UL6 codons 307-515) amplified by PCR from pYEbac102Cre ( , ) using the primers 5′-gcgaattccgcaagagcgacagcgagcg-3′ and 5′-gcaagctttcagtgctgaaaactgttggcga-3′ into pMAL-c (New England Biolabs) in-frame with MBP.

    Article Title: Phosphorylation of Arabidopsis UVR8 photoreceptor modulates protein interactions and responses to UV-B radiation
    Article Snippet: .. The coding sequences of Arabidopsis UVR8 wild-type and mutants N-terminally fused with GFP, and RUP1, RUP2 or COP1 N-terminally fused with HA were cloned into the pcDNA3.1 mammalian expression plasmid (ThermoFisher) between the Hin dIII and Eco RI sites using an In-Fusion HD Cloning kit (Takara Bio, USA). ..

    Construct:

    Article Title: Evolution-guided prioritization identifies a tissue-specific phosphorylation switch on herpes simplex virus 1 UL7 regulating viral replication and pathogenicity
    Article Snippet: .. pRetroX-TRE3G-UL6o, used to generate stable Vero cells with tetracycline-inducible UL6 expression, was constructed by cloning the entire coding sequences of codon-optimized UL6o amplified via PCR from pUC57-UL6o, which were synthesized (GenScript) using the primers 5′-gcggatccgcaaccatgacagc-3′ and 5′-gcgaattcgcaagagcgacagcgagcg-3′, into Bam HI and Eco RI sites of pRetroX-TRE3G (TaKaRa). .. The synthesized DNA sequences are shown in . pMAL-UL6-P1, used to generate a fusion protein of maltose-binding protein (MBP) and a domain of UL6, was constructed by cloning the domains of UL6 (encoded by UL6 codons 307-515) amplified by PCR from pYEbac102Cre ( , ) using the primers 5′-gcgaattccgcaagagcgacagcgagcg-3′ and 5′-gcaagctttcagtgctgaaaactgttggcga-3′ into pMAL-c (New England Biolabs) in-frame with MBP.

    Article Title: SUMO1 modification of 0N4R-tau is regulated by PIASx, SENP1, SENP2, and TRIM11
    Article Snippet: pRK5-EGFP-Tau (0N4R) was a gift from Karen Ashe (Addgene plasmid # 46904) [ ]. .. To construct pcDNA-FLAG-tau, tau cDNA was amplified by PCR with primers (5′-ACGATGACAAGCTTGGCATGGACGAGCTGTACAAG-3′ and 5′- GATATCTGCAGAATTCTCGACTCACAAACCCTGCTT-3′) and inserted between the Kpn I and Eco RI sites of pcDNA3.1(+) with FLAG sequence (ACCATGGATTACAAGGACGACGATGAC between Nhe I and Hin dIII sites) by In-Fusion Cloning (Takara Bio, Shiga, Japan). ..

    Synthesized:

    Article Title: Evolution-guided prioritization identifies a tissue-specific phosphorylation switch on herpes simplex virus 1 UL7 regulating viral replication and pathogenicity
    Article Snippet: .. pRetroX-TRE3G-UL6o, used to generate stable Vero cells with tetracycline-inducible UL6 expression, was constructed by cloning the entire coding sequences of codon-optimized UL6o amplified via PCR from pUC57-UL6o, which were synthesized (GenScript) using the primers 5′-gcggatccgcaaccatgacagc-3′ and 5′-gcgaattcgcaagagcgacagcgagcg-3′, into Bam HI and Eco RI sites of pRetroX-TRE3G (TaKaRa). .. The synthesized DNA sequences are shown in . pMAL-UL6-P1, used to generate a fusion protein of maltose-binding protein (MBP) and a domain of UL6, was constructed by cloning the domains of UL6 (encoded by UL6 codons 307-515) amplified by PCR from pYEbac102Cre ( , ) using the primers 5′-gcgaattccgcaagagcgacagcgagcg-3′ and 5′-gcaagctttcagtgctgaaaactgttggcga-3′ into pMAL-c (New England Biolabs) in-frame with MBP.

    Sequencing:

    Article Title: SUMO1 modification of 0N4R-tau is regulated by PIASx, SENP1, SENP2, and TRIM11
    Article Snippet: pRK5-EGFP-Tau (0N4R) was a gift from Karen Ashe (Addgene plasmid # 46904) [ ]. .. To construct pcDNA-FLAG-tau, tau cDNA was amplified by PCR with primers (5′-ACGATGACAAGCTTGGCATGGACGAGCTGTACAAG-3′ and 5′- GATATCTGCAGAATTCTCGACTCACAAACCCTGCTT-3′) and inserted between the Kpn I and Eco RI sites of pcDNA3.1(+) with FLAG sequence (ACCATGGATTACAAGGACGACGATGAC between Nhe I and Hin dIII sites) by In-Fusion Cloning (Takara Bio, Shiga, Japan). ..

    Clone Assay:

    Article Title: Phosphorylation of Arabidopsis UVR8 photoreceptor modulates protein interactions and responses to UV-B radiation
    Article Snippet: .. The coding sequences of Arabidopsis UVR8 wild-type and mutants N-terminally fused with GFP, and RUP1, RUP2 or COP1 N-terminally fused with HA were cloned into the pcDNA3.1 mammalian expression plasmid (ThermoFisher) between the Hin dIII and Eco RI sites using an In-Fusion HD Cloning kit (Takara Bio, USA). ..

    Plasmid Preparation:

    Article Title: Phosphorylation of Arabidopsis UVR8 photoreceptor modulates protein interactions and responses to UV-B radiation
    Article Snippet: .. The coding sequences of Arabidopsis UVR8 wild-type and mutants N-terminally fused with GFP, and RUP1, RUP2 or COP1 N-terminally fused with HA were cloned into the pcDNA3.1 mammalian expression plasmid (ThermoFisher) between the Hin dIII and Eco RI sites using an In-Fusion HD Cloning kit (Takara Bio, USA). ..



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